STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41184.1Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
arsR-4
ArsR family transcriptional regulator.
 
    0.951
AKT41185.1
Uncharacterized protein.
       0.773
arsR-3
ArsR family transcriptional regulator.
  
    0.540
AKT41181.1
Quinol oxidase.
       0.515
AKT42697.1
Uncharacterized protein.
  
     0.482
AKT36026.1
Acetyltransferase.
  
     0.460
AKT41305.1
DNA-directed RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.448
AKT40568.1
Uncharacterized protein.
  
     0.441
AKT36147.1
Outer membrane protein.
  
     0.432
AKT36046.1
Uncharacterized protein.
  
     0.430
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.