STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41409.1Short-chain dehydrogenase. (756 aa)    
Predicted Functional Partners:
AKT36072.1
Sulfatase.
 
 
 0.547
AKT41319.1
Uncharacterized protein.
  
 
 0.545
betC
Choline sulfatase.
 
 
 0.544
AKT36107.1
Uncharacterized protein.
  
  
 0.533
AKT41408.1
Decarboxylase.
     
 0.486
AKT40517.1
Xylulose kinase.
  
  
 0.478
tal-2
Uncharacterized protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transketolase family.
  
  
 0.472
AKT36410.1
Uncharacterized protein.
  
 
 0.456
AKT40437.1
Uncharacterized protein.
  
 
 0.456
AKT39774.1
Uncharacterized protein.
  
 
 0.447
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.