STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41422.1Uncharacterized protein. (437 aa)    
Predicted Functional Partners:
AKT41421.1
Uncharacterized protein.
  
 0.995
AKT41420.1
Uncharacterized protein.
       0.773
AKT37154.1
Uncharacterized protein.
  
 
 0.661
AKT38836.1
Uncharacterized protein.
  
 
 0.661
AKT39748.1
ABC transporter permease.
  
 
 0.661
AKT39843.1
Membrane protein.
  
 
 0.661
AKT41943.1
ABC transporter permease.
  
 
 0.661
AKT41423.1
Na+-driven multidrug efflux pump.
       0.507
AKT36255.1
O-acyltransferase; Belongs to the membrane-bound acyltransferase family.
  
  
 0.502
AKT38001.1
4Fe-4S ferredoxin.
  
  
 0.497
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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