STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41423.1Na+-driven multidrug efflux pump. (486 aa)    
Predicted Functional Partners:
AKT41424.1
Protein kinase.
 
     0.636
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.625
crtB
Phytoene synthase.
   
 
 0.619
AKT37454.1
Uncharacterized protein.
   
 
 0.619
AKT43995.1
Uncharacterized protein.
  
   0.580
AKT41634.1
Uncharacterized protein.
  
     0.554
AKT38741.1
Membrane protein.
  
     0.531
AKT40650.1
Uncharacterized protein.
   
    0.525
rpsA
30S ribosomal protein S1.
   
    0.525
rpsA-2
30S ribosomal protein S1.
   
    0.525
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.