STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetR-13TetR family transcriptional regulator. (243 aa)    
Predicted Functional Partners:
AKT41453.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.825
AKT41452.1
Uncharacterized protein.
       0.723
AKT37749.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.518
AKT41763.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.498
AKT41727.1
acyl-CoA thioesterase-like protein.
  
     0.475
tetR-21
TetR family transcriptional regulator.
  
     0.475
tetR-7
TetR family transcriptional regulator.
  
   
 0.460
uvrA-3
Excinuclease ABC subunit A.
       0.447
AKT41456.1
Membrane protein.
       0.447
AKT41885.1
Uncharacterized protein.
  
     0.436
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.