STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41499.1Antibiotic transporter. (334 aa)    
Predicted Functional Partners:
AKT36545.1
Uncharacterized protein.
  
     0.691
porD-6
Ferredoxin.
  
     0.658
tetR-12
TetR family transcriptional regulator.
  
     0.641
AKT38210.1
Uncharacterized protein.
  
     0.637
AKT38212.1
Uncharacterized protein.
  
     0.603
AKT38805.1
Uncharacterized protein.
  
   
 0.603
vgb
Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
     0.595
tetR-16
TetR family transcriptional regulator.
  
     0.552
AKT38089.1
Acyltransferase.
  
    0.525
AKT40028.1
ATPase.
  
     0.523
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.