STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41602.1Cation transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1084 aa)    
Predicted Functional Partners:
AKT41603.1
Cytochrome C peroxidase; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.963
AKT41604.1
Metal ion efflux outer membrane protein.
 
  
 0.874
AKT42372.1
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.841
AKT40343.1
Uncharacterized protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.839
AKT42987.1
Uncharacterized protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.832
czcB
Cation efflux system protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.824
AKT40342.1
Uncharacterized protein.
 
  
 0.646
AKT41601.1
Uncharacterized protein.
       0.636
hlyD-2
Secretion protein HlyD.
 
 
 0.512
AKT41781.1
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.494
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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