STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41604.1Metal ion efflux outer membrane protein. (404 aa)    
Predicted Functional Partners:
AKT41603.1
Cytochrome C peroxidase; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.924
AKT41602.1
Cation transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.874
AKT38558.1
Hemolysin D.
  
 
 0.725
AKT40267.1
Uncharacterized protein.
  
     0.703
AKT42697.1
Uncharacterized protein.
  
     0.685
AKT38679.1
Uncharacterized protein.
  
    0.682
AKT36746.1
Uncharacterized protein.
  
  
 0.681
AKT41684.1
Oligosaccharyl transferase.
  
     0.672
AKT39620.1
Uncharacterized protein.
  
     0.662
capB
Capsule biosynthesis protein CapB.
  
     0.660
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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