STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41650.1Diguanylate cyclase. (318 aa)    
Predicted Functional Partners:
AKT41879.1
Phosphohydrolase.
 
 0.960
AKT39187.1
Uncharacterized protein.
 
  
 0.951
AKT36127.1
Transcriptional regulator.
  
 0.902
AKT36799.1
Histidine kinase.
  
 0.781
AKT42973.1
Uncharacterized protein.
 
 
 0.767
AKT36039.1
Uncharacterized protein.
  
 0.760
AKT43916.1
Two-component hybrid sensor and regulator.
 
 
 0.751
AKT37409.1
Transcriptional regulator.
 
  
 0.731
AKT37460.1
Diguanylate cyclase.
  
 
 0.721
AKT40030.1
Serine/threonine protein kinase.
 
 
 0.718
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.