STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41693.1Type II secretion system protein E. (565 aa)    
Predicted Functional Partners:
pilC
Pilus biosynthesis protein PilC.
 
 0.988
gspF
General secretion pathway protein GspF.
 
 0.944
pilM
Pilus assembly protein PilM.
 
 
 
 0.942
pilQ
Pilus assembly protein PilQ.
 
 
 
 0.893
AKT36225.1
Uncharacterized protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.879
pilT-2
Twitching motility protein PilT.
 
  
0.856
AKT38382.1
Uncharacterized protein.
  
 
 0.817
AKT42624.1
Uncharacterized protein.
    
   0.759
gspG
General secretion pathway protein GspG.
  
 
 0.662
AKT41052.1
Fimbiral protein pilA.
  
 
 0.645
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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