STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41771.1Short-chain dehydrogenase. (247 aa)    
Predicted Functional Partners:
glcE-2
FAD-binding protein.
 
  
 0.949
AKT38234.1
3-oxoacyl-ACP reductase.
  
 
   0.755
AKT39484.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.736
AKT42230.1
Oxidoreductase.
  
 
   0.718
AKT41180.1
Short-chain dehydrogenase.
  
 
   0.717
AKT37929.1
Short-chain dehydrogenase.
  
 
   0.706
ubiA
Prenyltransferase UbiA; Belongs to the UbiA prenyltransferase family.
 
  
 0.703
AKT37973.1
Pteridine reductase.
  
 
   0.682
dhs
Deoxyhypusine synthase; Belongs to the deoxyhypusine synthase family.
       0.675
AKT36087.1
Short-chain dehydrogenase.
  
 
   0.673
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.