STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcE-2FAD-binding protein. (480 aa)    
Predicted Functional Partners:
AKT41771.1
Short-chain dehydrogenase.
 
  
 0.949
ubiA
Prenyltransferase UbiA; Belongs to the UbiA prenyltransferase family.
 
  
 0.853
dhs
Deoxyhypusine synthase; Belongs to the deoxyhypusine synthase family.
       0.682
AKT41773.1
ABC transporter ATP-binding protein.
  
    0.487
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.472
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.441
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.440
AKT43632.1
Glutamate synthase.
     
 0.429
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.416
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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