STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41800.1Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
AKT41799.1
Uncharacterized protein.
 
    
0.841
AKT36502.1
Uncharacterized protein.
 
   
 0.782
AKT36056.1
Uncharacterized protein.
  
     0.763
hxsB
His-Xaa-Ser system radical SAM maturase HxsB.
 
   
 0.763
AKT39089.1
Uncharacterized protein.
  
     0.750
AKT39088.1
Uncharacterized protein.
  
     0.747
AKT42410.1
Uncharacterized protein.
 
     0.739
AKT39087.1
Uncharacterized protein.
  
     0.737
AKT43107.1
Uncharacterized protein.
  
     0.736
AKT39622.1
Uncharacterized protein.
  
    0.735
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.