STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41942.1ABC transporter. (380 aa)    
Predicted Functional Partners:
AKT41943.1
ABC transporter permease.
 
 
 0.974
AKT41944.1
Uncharacterized protein.
 
  
 0.947
AKT39843.1
Membrane protein.
 
 0.880
AKT39748.1
ABC transporter permease.
 
 
 0.874
AKT39747.1
Uncharacterized protein.
 
  
 0.785
AKT41945.1
Uncharacterized protein.
 
     0.748
AKT41962.1
Uncharacterized protein.
 
  
0.599
AKT36270.1
ABC transporter ATP-binding protein.
  
     0.533
AKT39842.1
ABC transporter.
  
 0.526
AKT37154.1
Uncharacterized protein.
  
 
 0.463
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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