STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfaCyclopropane-fatty-acyl-phospholipid synthase. (294 aa)    
Predicted Functional Partners:
prpE-4
acyl-CoA synthetase.
 
   
 0.798
acpP-5
Acyl carrier protein.
     
 0.654
cobO
cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
   
    0.522
kbaY
Fructose-bisphosphate aldolase.
   
    0.502
kbaY-2
Fructose-bisphosphate aldolase.
   
    0.502
fabH-7
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.482
ajuL
Uncharacterized protein.
  
  
 0.444
cmdD
Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine.
     
 0.443
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.435
cndA
Uncharacterized protein.
  
  
 0.430
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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