STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41959.1Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
AKT41960.1
Uncharacterized protein.
 
     0.734
AKT38665.1
Uncharacterized protein.
   
    0.560
AKT41040.1
Uncharacterized protein.
  
 
  0.552
AKT40165.1
Uncharacterized protein.
  
     0.529
AKT41962.1
Uncharacterized protein.
 
     0.490
AKT37412.1
Uncharacterized protein.
  
     0.472
AKT35990.1
Integral membrane protein.
  
     0.464
AKT40712.1
Uncharacterized protein.
  
     0.461
AKT41961.1
Uncharacterized protein.
       0.456
AKT39011.1
Alpha/beta hydrolase.
  
     0.454
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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