STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41991.1Cytochrome C assembly protein. (242 aa)    
Predicted Functional Partners:
AKT39772.1
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
 0.998
AKT37234.1
Uncharacterized protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.994
AKT36437.1
Cytochrome C biogenesis protein.
 
  
 0.880
ccmA
Heme ABC exporter ATP-binding protein CcmA.
 
  
  0.846
cobA
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.825
AKT41990.1
Uncharacterized protein.
       0.804
AKT41989.1
Uncharacterized protein.
       0.779
ccmF
Cytochrome C-type biogenesis protein; Possible subunit of a heme lyase.
 
   
 0.718
fadE-15
acyl-CoA dehydrogenase.
       0.623
hemD
Uroporphyrinogen III methyltransferase.
  
    0.546
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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