STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT42101.1Glycosyl hydrolase. (451 aa)    
Predicted Functional Partners:
AKT37413.1
Peptide transporter.
  
     0.657
AKT42099.1
Oxidoreductase.
 
     0.586
AKT36458.1
Uncharacterized protein.
 
      0.583
AKT40334.1
Uncharacterized protein.
  
   
 0.563
AKT39636.1
Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family.
  
    0.553
AKT40466.1
Uncharacterized protein.
 
     0.531
AKT42100.1
Uncharacterized protein.
       0.530
AKT36750.1
Uncharacterized protein.
  
     0.524
AKT38124.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
    0.518
AKT41365.1
Endo-1,4-beta-glucanase.
  
   
 0.506
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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