STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porD-6Ferredoxin. (65 aa)    
Predicted Functional Partners:
tetR-16
TetR family transcriptional regulator.
 
     0.942
AKT42108.1
Cytochrome P450.
 
  
 0.899
AKT42111.1
Pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.894
tetR-12
TetR family transcriptional regulator.
  
     0.694
AKT41499.1
Antibiotic transporter.
  
     0.658
AKT38528.1
FAD-dependent oxidoreductase.
  
     0.590
AKT37609.1
Uncharacterized protein.
 
     0.582
AKT43308.1
Uncharacterized protein.
  
     0.576
AKT37967.1
Uncharacterized protein; Belongs to the cytochrome P450 family.
 
  
 0.570
AKT36545.1
Uncharacterized protein.
  
     0.569
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.