STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG78285.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
KXG78284.1
Hypothetical protein.
       0.856
KXG78287.1
Hypothetical protein.
       0.856
KXG78283.1
Hypothetical protein.
  
    0.855
xkdM
Phage-like element PBSX protein XkdM.
       0.827
KXG78282.1
Hypothetical protein.
       0.786
KXG78286.1
Hypothetical protein.
       0.773
KXG78281.1
Hypothetical protein.
       0.757
KXG78280.1
Hypothetical protein.
       0.745
KXG78289.1
Hypothetical protein.
       0.719
KXG78279.1
Hypothetical protein.
       0.707
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.