Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG73591.1 | cheY_2 | AN619_30770 | AN619_30750 | Hypothetical protein. | Chemotaxis protein CheY. | 0.741 |
KXG73591.1 | glnK | AN619_30770 | AN619_30760 | Hypothetical protein. | Sensor histidine kinase GlnK. | 0.741 |
KXG73591.1 | gltP | AN619_30770 | AN619_30740 | Hypothetical protein. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.473 |
KXG74312.1 | argD_1 | AN619_24420 | AN619_17250 | Hypothetical protein. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.515 |
KXG74312.1 | gltP | AN619_24420 | AN619_30740 | Hypothetical protein. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.446 |
KXG74312.1 | prpC1 | AN619_24420 | AN619_22090 | Hypothetical protein. | 2-methylcitrate synthase 1. | 0.618 |
KXG74312.1 | thrS | AN619_24420 | AN619_01210 | Hypothetical protein. | Threonine--tRNA ligase 1. | 0.879 |
KXG74312.1 | udk | AN619_24420 | AN619_07620 | Hypothetical protein. | Uridine kinase. | 0.821 |
alsT | gltP | AN619_11150 | AN619_30740 | Amino-acid carrier protein AlsT. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.452 |
argD_1 | KXG74312.1 | AN619_17250 | AN619_24420 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.515 |
argD_1 | gltP | AN619_17250 | AN619_30740 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.481 |
argD_1 | prpC1 | AN619_17250 | AN619_22090 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 2-methylcitrate synthase 1. | 0.595 |
cheY_2 | KXG73591.1 | AN619_30750 | AN619_30770 | Chemotaxis protein CheY. | Hypothetical protein. | 0.741 |
cheY_2 | glnK | AN619_30750 | AN619_30760 | Chemotaxis protein CheY. | Sensor histidine kinase GlnK. | 0.994 |
cheY_2 | gltP | AN619_30750 | AN619_30740 | Chemotaxis protein CheY. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.529 |
cheY_2 | gmr_1 | AN619_30750 | AN619_10390 | Chemotaxis protein CheY. | Cyclic di-GMP phosphodiesterase Gmr. | 0.787 |
glnK | KXG73591.1 | AN619_30760 | AN619_30770 | Sensor histidine kinase GlnK. | Hypothetical protein. | 0.741 |
glnK | cheY_2 | AN619_30760 | AN619_30750 | Sensor histidine kinase GlnK. | Chemotaxis protein CheY. | 0.994 |
glnK | gltP | AN619_30760 | AN619_30740 | Sensor histidine kinase GlnK. | Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.542 |
glnK | gmr_1 | AN619_30760 | AN619_10390 | Sensor histidine kinase GlnK. | Cyclic di-GMP phosphodiesterase Gmr. | 0.924 |
page 1 of 3