STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltPProton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (424 aa)    
Predicted Functional Partners:
gmr_1
Cyclic di-GMP phosphodiesterase Gmr.
  
  
 0.631
glnK
Sensor histidine kinase GlnK.
     
 0.542
cheY_2
Chemotaxis protein CheY.
  
    0.529
argD_1
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.481
KXG73591.1
Hypothetical protein.
       0.473
prpC1
2-methylcitrate synthase 1.
  
  
 0.459
alsT
Amino-acid carrier protein AlsT.
  
  
 0.452
udk
Uridine kinase.
   
 
  0.447
thrS
Threonine--tRNA ligase 1.
   
 
  0.446
KXG74312.1
Hypothetical protein.
  
 
 0.446
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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