STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpal_0078PFAM: lipolytic protein G-D-S-L family; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: hma:pNG7210 carbohydrate binding module (family 6) protein. (1234 aa)    
Predicted Functional Partners:
Mpal_0077
Hypothetical protein.
       0.562
Mpal_1102
KEGG: sen:SACE_0614 hypothetical protein.
  
     0.461
Mpal_1411
KEGG: amt:Amet_1544 abortive infection protein.
  
     0.449
Mpal_1439
PFAM: Ion transport 2 domain protein; KEGG: hypothetical protein.
  
     0.400
Mpal_2112
PFAM: Erythromycin esterase; KEGG: rha:RHA1_ro04680 erythromycin esterase.
  
     0.400
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.