STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpal_2757PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: tbd:Tbd_0674 major facilitator superfamily protein. (409 aa)    
Predicted Functional Partners:
Mpal_2756
Putative PAS/PAC sensor protein; KEGG: mem:Memar_0872 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     
 0.548
Mpal_1131
PFAM: major facilitator superfamily MFS_1; KEGG: rci:RCIX725 major facilitator superfamily permease.
  
     0.451
Mpal_2113
PFAM: extracellular solute-binding protein family 3; sodium:dicarboxylate symporter; KEGG: mac:MA0491 solute-binding family 3 protein.
 
  
 0.409
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.