STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF37314.1Sulfotransferase family protein. (329 aa)    
Predicted Functional Partners:
SDF37346.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.938
SDE80520.1
Protein of unknown function.
    
 
 0.752
SDF37037.1
Glycosyltransferase, GT2 family.
  
 
   0.750
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.746
SDF37435.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  
 0.672
SDF37405.1
Hypothetical protein.
       0.649
SDF32005.1
Transcriptional regulatory protein, C terminal; Manually curated.
  
     0.623
SDE19111.1
Phage conserved hypothetical protein BR0599.
   
   0.564
SDE19141.1
TIGR02217 family protein.
   
   0.564
SDF37283.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.558
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.