STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aaci_0346Peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; Fibronectin type III domain protein; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase. (863 aa)    
Predicted Functional Partners:
Aaci_0345
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: eic:NT01EI_2820 D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family.
  
 
 0.968
Aaci_2124
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase.
 
  
 
0.929
Aaci_2797
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: pla:Plav_0008 1A family penicillin-binding protein.
 
  
 
0.928
Aaci_1748
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: sfu:Sfum_1305 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.913
Aaci_0663
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.906
Aaci_1297
TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: ank:AnaeK_2549 DivIVA family protein.
   
 
 0.765
Aaci_1031
TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: geo:Geob_0779 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.701
Aaci_1034
PFAM: cell cycle protein; KEGG: mxa:MXAN_2648 rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 
 0.642
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.632
Aaci_1276
TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; KEGG: geo:Geob_0779 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.619
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.