STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403775_01481Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_001403775_01479
Unannotated protein.
 0.999
GCA_001403775_01480
Unannotated protein.
 
0.999
GCA_001403775_01252
Unannotated protein.
   
 0.946
GCA_001403775_01287
Unannotated protein.
   
 0.946
GCA_001403775_01218
Unannotated protein.
   
 
 0.902
GCA_001403775_00493
Unannotated protein.
   
 0.857
GCA_001403775_00576
Unannotated protein.
   
 
 0.836
GCA_001403775_01483
Unannotated protein.
  
 0.797
GCA_001403775_01219
Unannotated protein.
   
 
 0.792
GCA_001403775_02054
Unannotated protein.
   
  
 0.770
Your Current Organism:
Helcobacillus massiliensis
NCBI taxonomy Id: 521392
Other names: CCUG 53859, CIP 109418, CSUR P17, DSM 23040, H. massiliensis, Helcobacillus massiliensis Renvoise et al. 2009, strain 6401990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.