STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (223 aa)    
Predicted Functional Partners:
M231_07868
40S ribosomal protein S9-A; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
M231_07867
50S small subunit ribosomal protein L21e.
  
 
 0.999
M231_07234
40S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family.
   
 0.999
M231_06813
50S small subunit ribosomal protein L34e.
   
 
 0.999
M231_07952
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
M231_06777
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
M231_06642
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.999
M231_06054
60S ribosomal protein L8.
   
 
 0.999
M231_06643
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
M231_07325
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.