STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_00147HDAC_interact domain-containing protein. (1274 aa)    
Predicted Functional Partners:
M231_05605
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
  0.901
M231_00313
PHD-type domain-containing protein.
   
 
 0.892
M231_07289
Histone acetyltransferase type B subunit 2.
   
 0.873
M231_04218
Mortality factor 4-like protein 1.
   
 0.860
M231_00745
Uncharacterized protein.
     
  0.800
M231_07136
Uncharacterized protein.
   
 0.745
M231_07135
Histone deacetylase RPD3.
   
 0.745
M231_01967
Histone deacetylase 1/2.
   
 0.745
M231_03873
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.703
M231_05670
Uncharacterized protein.
   
 0.697
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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