STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_00122Cytoplasmic protein. (614 aa)    
Predicted Functional Partners:
M231_04952
Ribosomal protein L15.
   
 
 0.880
M231_01433
Uncharacterized protein.
   
 
 0.864
M231_01025
Ribosomal protein S15.
  
 
 0.864
M231_01322
Translation initiation factor IF-2.
  
 0.859
M231_02491
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.843
M231_03269
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.840
M231_01581
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.824
M231_00834
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.824
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.796
M231_00711
Ribosomal protein L27.
  
 
 0.790
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.