STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV33519.1PFAM: outer membrane efflux protein; KEGG: mms:mma_3050 outer membrane cation efflux system protein. (408 aa)    
Predicted Functional Partners:
ACV33520.1
Hypothetical protein; KEGG: mrd:Mrad2831_2533 efflux transporter, RND family, MFP subunit.
 
   0.950
ACV33521.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tbd:Tbd_1747 hypothetical protein.
 
   0.948
ACV33522.1
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: tbd:Tbd_1746 heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.917
ACV33523.1
KEGG: tbd:Tbd_1745 hypothetical protein.
 
     0.815
ACV33943.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rfr:Rfer_0619 TonB-dependent receptor.
  
   
 0.467
ACV35507.1
PFAM: secretion protein HlyD family protein; KEGG: pap:PSPA7_5975 hypothetical protein.
  
 
 0.463
ACV37525.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3461 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.463
ACV34665.1
PFAM: secretion protein HlyD family protein; KEGG: rle:pRL90165 putative transmembrane HlyD type I secretion protein.
  
 
 0.453
ACV34809.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_2552 type I secretion membrane fusion protein, HlyD family.
  
 
 0.453
ACV36109.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4763 heme acquisition transporter, membrane fusion protein HasE.
  
 
 0.453
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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