STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_0921KEGG: mpo:Mpop_3541 transferase hexapeptide repeat containing protein. (163 aa)    
Predicted Functional Partners:
Kkor_1881
KEGG: swp:swp_3307 transferase hexapeptide repeat protein.
 
     0.773
Kkor_0929
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: attR; transacetylase.
 
    
0.613
Kkor_0923
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: vpa:VPA1412 polysaccharide biosynthesis-like protein.
  
  
 0.584
Kkor_0928
PFAM: glycosyl transferase group 1; KEGG: hch:HCH_05274 glycosyltransferase.
  
  
 0.558
Kkor_0926
KEGG: bat:BAS1496 hypothetical protein.
  
    0.487
Kkor_0919
KEGG: vvy:VV0341 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.485
Kkor_0920
TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: vvu:VV1_0779 UDP-N-acetyl-D-mannosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.475
Kkor_0917
PFAM: lipopolysaccharide biosynthesis protein; KEGG: shw:Sputw3181_1462 lipopolysaccharide biosynthesis protein.
  
  
 0.471
Kkor_0932
Glycosyl transferase, WecB/TagA/CpsF family; KEGG: sec:SC3834 putative UDP-N-acetyl-D- mannosaminuronic acid transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
       0.462
Kkor_0930
Hypothetical protein; KEGG: sme:SM_b21237 sulfotransferase domain- containing protein.
       0.456
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.