STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kkor_2503TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: sfr:Sfri_2377 FHA domain containing protein. (466 aa)    
Predicted Functional Partners:
Kkor_2500
TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: OmpA/MotB domain protein; KEGG: sfr:Sfri_2374 OmpA/MotB domain protein.
 
  
 0.966
Kkor_2501
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: pap:PSPA7_0150 hypothetical protein.
 
  
 0.963
Kkor_2502
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pst:PSPTO_5421 putative lipoprotein.
 
  
 0.961
Kkor_2496
TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: sde:Sde_1528 hypothetical protein.
 
  
 0.948
Kkor_2499
TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: sfr:Sfri_2373 ImcF domain protein.
 
  
 0.942
Kkor_2498
TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; KEGG: sde:Sde_1521 GTP-binding.
 
  
 0.941
Kkor_2494
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: vvy:VVA0986 hypothetical protein.
 
  
 0.933
Kkor_2495
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: sde:Sde_1529 hypothetical protein.
 
  
 0.932
Kkor_2497
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: sfr:Sfri_2371 protein serine/threonine phosphatase.
 
  
 0.913
Kkor_0395
PFAM: protein of unknown function DUF796; KEGG: slo:Shew_0197 hypothetical protein.
 
  
 0.819
Your Current Organism:
Kangiella koreensis
NCBI taxonomy Id: 523791
Other names: K. koreensis DSM 16069, Kangiella koreensis DSM 16069, Kangiella koreensis JCM 12318, Kangiella koreensis KCTC 12183, Kangiella koreensis SW-125, Kangiella koreensis str. DSM 16069, Kangiella koreensis strain DSM 16069
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