STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lebu_0183KEGG: fma:FMG_1610 hypothetical protein. (242 aa)    
Predicted Functional Partners:
Lebu_0184
Membrane protein-like protein; KEGG: efa:EF1939 hypothetical protein.
       0.705
Lebu_0185
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fnu:FN1050 lactoylglutathione lyase.
       0.588
Lebu_0282
PFAM: TraX family protein; KEGG: cbk:CLL_A2054 hypothetical protein.
  
     0.540
Lebu_0182
PFAM: glycoside hydrolase family 1; KEGG: efa:EF0271 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.467
Lebu_0186
KEGG: eca:ECA1475 hypothetical protein.
       0.418
Your Current Organism:
Leptotrichia buccalis
NCBI taxonomy Id: 523794
Other names: L. buccalis C-1013-b, Leptotrichia buccalis C-1013-b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.