STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lebu_1551TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: asu:Asuc_0551 cation diffusion facilitator family transporter. (309 aa)    
Predicted Functional Partners:
Lebu_1953
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; Rhodanese domain protein; SMART: Rhodanese domain protein; regulatory protein ArsR; KEGG: lci:LCK_p300014 thiosulfate sulfurtransferase.
     
 0.530
Lebu_0613
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tme:Tmel_0074 cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
0.476
Lebu_1550
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: fnu:FN0847 TPR repeat-containing protein.
       0.452
Lebu_1814
PFAM: iron permease FTR1; KEGG: stl:stu1022 hypothetical protein.
 
   
 0.419
Lebu_1813
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
   
 0.406
Lebu_0530
KEGG: lmf:LMOf2365_0481 hypothetical protein.
  
 0.404
Your Current Organism:
Leptotrichia buccalis
NCBI taxonomy Id: 523794
Other names: L. buccalis C-1013-b, Leptotrichia buccalis C-1013-b
Server load: low (32%) [HD]