STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnK2Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (123 aa)    
Predicted Functional Partners:
amt2
Ammonium transporter.
 
 0.996
amt1
Ammonium transporter.
 
 0.969
glnK1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
  
0.937
argB
Acetylglutamate kinase; Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis); Belongs to the acetylglutamate kinase family. LysZ subfamily.
    
 
 0.829
glnA-2
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
  
  
 0.659
glnA-3
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
  
  
 0.659
tpr
TPR repeat-containing protein.
    
 
 0.650
HFX_1825
Hypothetical protein.
    
 
 0.650
glnA
Glutamine synthetase.
  
  
 0.633
livF
ABC-type branched-chain amino acid transport systems, ATP-binding protein II.
     
 0.500
Your Current Organism:
Haloferax mediterranei
NCBI taxonomy Id: 523841
Other names: H. mediterranei ATCC 33500, Haloferax mediterranei ATCC 33500, Haloferax mediterranei CGMCC 1.2087, Haloferax mediterranei JCM 8866, Haloferax mediterranei R-4, Haloferax mediterranei str. ATCC 33500, Haloferax mediterranei strain ATCC 33500
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