Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acnA | amt1 | HFX_0511 | HFX_0095 | Aconitate hydratase. | Ammonium transporter. | 0.481 |
| acnA | citB | HFX_0511 | HFX_2049 | Aconitate hydratase. | Aconitate hydratase. | 0.900 |
| acnA | dnaJ-2 | HFX_0511 | HFX_1648 | Aconitate hydratase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.511 |
| amt1 | acnA | HFX_0095 | HFX_0511 | Ammonium transporter. | Aconitate hydratase. | 0.481 |
| amt1 | citB | HFX_0095 | HFX_2049 | Ammonium transporter. | Aconitate hydratase. | 0.481 |
| amt1 | dnaJ-2 | HFX_0095 | HFX_1648 | Ammonium transporter. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.539 |
| amt1 | glnK1 | HFX_0095 | HFX_0094 | Ammonium transporter. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.988 |
| amt1 | glnK2 | HFX_0095 | HFX_0092 | Ammonium transporter. | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | 0.969 |
| amt1 | gltS | HFX_0095 | HFX_0844 | Ammonium transporter. | Glutamate synthase large subunit. | 0.602 |
| amt1 | hemB | HFX_0095 | HFX_0096 | Ammonium transporter. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.437 |
| amt1 | kefC | HFX_0095 | HFX_2009 | Ammonium transporter. | Potassium transport protein kefC. | 0.517 |
| amt1 | modA | HFX_0095 | HFX_2216 | Ammonium transporter. | ABC transporter substrate-binding protein. | 0.417 |
| amt1 | yusM-2 | HFX_0095 | HFX_1201 | Ammonium transporter. | Proline dehydrogenase. | 0.707 |
| citB | acnA | HFX_2049 | HFX_0511 | Aconitate hydratase. | Aconitate hydratase. | 0.900 |
| citB | amt1 | HFX_2049 | HFX_0095 | Aconitate hydratase. | Ammonium transporter. | 0.481 |
| citB | dnaJ-2 | HFX_2049 | HFX_1648 | Aconitate hydratase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.511 |
| dnaJ-2 | acnA | HFX_1648 | HFX_0511 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Aconitate hydratase. | 0.511 |
| dnaJ-2 | amt1 | HFX_1648 | HFX_0095 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ammonium transporter. | 0.539 |
| dnaJ-2 | citB | HFX_1648 | HFX_2049 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Aconitate hydratase. | 0.511 |
| dnaJ-2 | kefC | HFX_1648 | HFX_2009 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Potassium transport protein kefC. | 0.622 |
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