STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC_07421Sugar kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the carbohydrate kinase PfkB family. (292 aa)    
Predicted Functional Partners:
OCC_09476
Xylose isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.588
OCC_07766
AP endonuclease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.551
OCC_10609
AP endonuclease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.551
OCC_07411
Zinc-dependent protease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.534
OCC_07416
Zinc-dependent protease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.522
glmS
Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.516
glkA
ADP-dependent glucokinase; Catalyzes the ADP-dependent phosphorylation of D-glucose to D-glucose 6-phosphate and glucosamine to glucosamine 6-phosphate. Can also use CDP as the phosphoryl group donor and D-1,5-anhydroglucitol as the phosphoryl group acceptor.
      
 0.503
OCC_05861
Dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.489
OCC_05866
Dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.489
OCC_03763
Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.479
Your Current Organism:
Thermococcus litoralis
NCBI taxonomy Id: 523849
Other names: T. litoralis DSM 5473, Thermococcus litoralis ATCC 51850, Thermococcus litoralis DSM 5473, Thermococcus litoralis JCM 8560, Thermococcus litoralis NS-C, Thermococcus litoralis str. DSM 5473, Thermococcus litoralis strain DSM 5473
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