STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAPFAM: Glutaminase, core; KEGG: ecy:ECSE_0510 putative glutaminase; Belongs to the glutaminase family. (310 aa)    
Predicted Functional Partners:
Ddes_0045
KEGG: lip:LI0261 glutamate decarboxylase isozyme; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.939
Ddes_1156
Ferredoxin-dependent glutamate synthase; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: ppd:Ppro_2160 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
     
 0.936
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.921
Ddes_1152
Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: tdn:Suden_1510 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.912
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.903
Ddes_1984
TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_0766 putative oxidoreductase.
   
 
 0.901
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
     
  0.900
Ddes_0976
KEGG: dvl:Dvul_1512 phosphoribosylformylglycinamidine synthase I.
     
  0.900
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: dvl:Dvul_2806 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
     
  0.900
carA
TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: dvl:Dvul_0268 carbamoyl phosphate synthase small subunit; Belongs to the CarA family.
     
  0.900
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.