node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ddes_0218 | Ddes_1504 | Ddes_0218 | Ddes_1504 | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | 0.609 |
Ddes_0218 | Ddes_1619 | Ddes_0218 | Ddes_1619 | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.458 |
Ddes_0218 | Ddes_2059 | Ddes_0218 | Ddes_2059 | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glycine C-acetyltransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I. | 0.743 |
Ddes_0218 | bioB | Ddes_0218 | Ddes_1301 | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.609 |
Ddes_0218 | bioF | Ddes_0218 | Ddes_0423 | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.502 |
Ddes_0628 | Ddes_1619 | Ddes_0628 | Ddes_1619 | PFAM: thiamine biosynthesis protein ThiC; KEGG: dvl:Dvul_1663 thiamine biosynthesis protein ThiC. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.455 |
Ddes_0628 | Ddes_2059 | Ddes_0628 | Ddes_2059 | PFAM: thiamine biosynthesis protein ThiC; KEGG: dvl:Dvul_1663 thiamine biosynthesis protein ThiC. | Glycine C-acetyltransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I. | 0.409 |
Ddes_0628 | bioB | Ddes_0628 | Ddes_1301 | PFAM: thiamine biosynthesis protein ThiC; KEGG: dvl:Dvul_1663 thiamine biosynthesis protein ThiC. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.523 |
Ddes_1076 | Ddes_1504 | Ddes_1076 | Ddes_1504 | Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | 0.483 |
Ddes_1076 | Ddes_2059 | Ddes_1076 | Ddes_2059 | Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Glycine C-acetyltransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I. | 0.710 |
Ddes_1076 | bioB | Ddes_1076 | Ddes_1301 | Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.483 |
Ddes_1504 | Ddes_0218 | Ddes_1504 | Ddes_0218 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | PFAM: aminotransferase class-III; KEGG: pin:Ping_0051 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.609 |
Ddes_1504 | Ddes_1076 | Ddes_1504 | Ddes_1076 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.483 |
Ddes_1504 | Ddes_1554 | Ddes_1504 | Ddes_1554 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvl:Dvul_1327 biotin--acetyl-CoA-carboxylase ligase. | 0.917 |
Ddes_1504 | Ddes_1619 | Ddes_1504 | Ddes_1619 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.444 |
Ddes_1504 | Ddes_2059 | Ddes_1504 | Ddes_2059 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | Glycine C-acetyltransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: neu:NE1388 aminotransferase class-I. | 0.806 |
Ddes_1504 | bioB | Ddes_1504 | Ddes_1301 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.900 |
Ddes_1504 | bioD | Ddes_1504 | Ddes_1300 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.609 |
Ddes_1504 | bioF | Ddes_1504 | Ddes_0423 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.581 |
Ddes_1504 | bioW | Ddes_1504 | Ddes_0424 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU1767 biotin synthase. | 6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP. | 0.670 |