STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddes_1917TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: dvl:Dvul_0534 DsrC family protein. (105 aa)    
Predicted Functional Partners:
Ddes_0920
KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
 
 
 
 0.934
Ddes_0921
KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
 
 
 0.934
Ddes_2294
KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
 
 
 
 0.934
Ddes_2295
KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
 
 
 0.934
Ddes_0451
PFAM: Nitrate reductase gamma subunit; KEGG: dvl:Dvul_1775 nitrate reductase, gamma subunit.
 
   
 0.831
Ddes_0450
KEGG: dvl:Dvul_1776 reductase, iron-sulfur binding subunit, putative.
 
 
 
 0.811
Ddes_0839
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pis:Pisl_0176 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 
 0.782
Ddes_2130
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2137 adenylylsulfate reductase, beta subunit.
  
   
 0.708
Ddes_0449
KEGG: dvl:Dvul_1777 cytochrome c family protein.
 
     0.687
Ddes_2126
Methyl-viologen-reducing hydrogenase delta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; KEGG: dvu:DVU0849 heterodisulfide reductase, iron-sulfur-binding subunit, putative.
  
   
 0.617
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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