STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH63440.1TrkA N-terminal domain protein; COG: COG0569; Pfam: PF02254; InterPro: IPR016040. (216 aa)    
Predicted Functional Partners:
EEH63441.1
TrkA N-terminal domain protein; COG: COG0569; Pfam: PF02254; InterPro: IPR016040.
 
  
0.923
EEH64505.1
Cation transport protein; COG: COG0168; Pfam: PF02386; InterPro: IPR003445.
  
 
 0.895
EEH63635.1
Cation transport protein; COG: COG0168; Pfam: PF02386; InterPro: IPR003445.
  
 
 0.895
EEH63439.1
Putative ATP synthase F0, A subunit.
 
     0.894
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.615
EEH63438.1
TRAM domain protein; COG: COG2265; Pfam: PF01938; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.609
EEH63369.1
Putative ribosomal RNA small subunit methyltransferase B; COG: COG0144; Pfam: PF01029,PF01189; InterPro: IPR001678; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.561
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.