STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72845.1Acetyl xylan esterase (AXE1); COG: COG3458. (314 aa)    
Predicted Functional Partners:
EEJ72846.1
Hypothetical protein; COG: COG3345; 3.2.1.22.
       0.785
EEJ72844.1
ABC transporter, solute-binding protein.
 
     0.758
EEJ72847.1
Alpha-galactosidase; COG: COG3345.
       0.732
ugpC2
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
       0.662
EEJ72843.1
ABC transporter, permease protein; COG: COG1175.
 
     0.536
EEJ72842.1
ABC transporter, permease protein; COG: COG0395.
 
     0.504
lacZ
Beta-galactosidase trimerization domain protein; COG: COG1874.
    0.467
EEJ72840.1
Glycosyl hydrolase, family 1; COG: COG2723; Belongs to the glycosyl hydrolase 1 family.
 
     0.400
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.