STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72368.1Hypothetical protein; COG: COG1404. (1663 aa)    
Predicted Functional Partners:
EEJ72723.1
Hypothetical protein.
  
 0.849
EEJ72151.1
Hypothetical protein.
  
 0.846
EEJ71446.1
Hypothetical protein.
  
 0.846
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
 
 0.724
EEJ72766.1
Peptidase family M1.
 
 
 0.657
EEJ72486.1
Hypothetical protein.
  
 
 0.626
prsA
PPIC-type PPIASE domain protein; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
  
 
 0.604
EEJ72605.1
FtsK/SpoIIIE family protein.
  
 
 0.580
EEJ72458.1
FtsK/SpoIIIE family protein; COG: COG1674; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.580
EEJ72912.1
Hypothetical protein.
  
     0.562
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.