STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72203.1Hypothetical protein; COG: COG3480. (344 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.947
EEJ72204.1
comEA protein; COG: COG1555.
      0.863
ftsW
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Belongs to the SEDS family.
       0.845
rsmD
RNA methyltransferase, RsmD family; COG: COG0742.
       0.845
EEJ72200.1
Hypothetical protein.
       0.792
EEJ72205.1
DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333.
       0.703
holA
DNA polymerase III, delta subunit; COG: COG1466.
       0.702
EEJ72572.1
Metallopeptidase, SprT family; COG: COG3091.
 
     0.651
typA
GTP-binding protein TypA; COG: COG1217.
       0.621
EEJ71017.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.520
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.