STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72205.1DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333. (761 aa)    
Predicted Functional Partners:
EEJ72204.1
comEA protein; COG: COG1555.
 
  
 0.957
holA
DNA polymerase III, delta subunit; COG: COG1466.
 
   
 0.924
EEJ72346.1
Bacterial type II secretion system domain protein F.
 
  
 0.892
EEJ72469.1
comF family protein; COG: COG1040.
 
  
 0.872
EEJ72347.1
Prepilin-type cleavage/methylation N-terminal domain protein.
  
  
 0.849
EEJ72345.1
Type II/IV secretion system protein; COG: COG2804.
 
  
 0.840
dprA
DNA protecting protein DprA; COG: COG0758.
  
  
 0.839
EEJ71095.1
Hypothetical protein.
  
  
 0.822
EEJ72348.1
Prepilin-type cleavage/methylation N-terminal domain protein.
  
  
 0.817
recJ
single-stranded-DNA-specific exonuclease RecJ; COG: COG0608.
     
 0.802
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.