STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71438.1SNARE-like domain protein; COG: COG0398. (208 aa)    
Predicted Functional Partners:
EEJ71439.1
Acetyltransferase, GNAT family.
       0.793
EEJ72446.1
Adenylate cyclase.
  
     0.703
EEJ71437.1
Hypothetical protein.
       0.529
EEJ71485.1
Methyltransferase domain protein.
    
  0.504
EEJ71253.1
Glycosyltransferase, group 1 family protein; COG: COG0438.
 
  
 0.501
EEJ71333.1
ABC transporter, permease protein; COG: COG0765.
 
     0.487
cdsA
Phosphatidate cytidylyltransferase; COG: COG0575.
    
  0.472
EEJ71254.1
Glycosyltransferase, group 1 family protein; COG: COG0438.
 
  
 0.467
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.456
plcR
Transcriptional regulator, Cro/CI family.
 
     0.435
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.