node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplX | rpmB | HMPREF0556_10421 | HMPREF0556_11216 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | 0.972 |
rplX | rpmG-2 | HMPREF0556_10421 | HMPREF0556_12474 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein L33; COG: COG0267; Pfam: PF00471; InterPro: IPR001705; Belongs to the bacterial ribosomal protein bL33 family. | 0.965 |
rplX | rpmH | HMPREF0556_10421 | HMPREF0556_10298 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein L34; COG: COG0230; Pfam: PF00468; InterPro: IPR000271; Belongs to the bacterial ribosomal protein bL34 family. | 0.966 |
rplX | rpmI | HMPREF0556_10421 | HMPREF0556_11251 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein L35; COG: COG0291; Pfam: PF01632; InterPro: IPR001706; Belongs to the bacterial ribosomal protein bL35 family. | 0.974 |
rplX | rpsD | HMPREF0556_10421 | HMPREF0556_12188 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.994 |
rplX | rpsH | HMPREF0556_10421 | HMPREF0556_10424 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.997 |
rplX | rpsI | HMPREF0556_10421 | HMPREF0556_10447 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein S9; COG: COG0103; Pfam: PF00380; InterPro: IPR000754; Belongs to the universal ribosomal protein uS9 family. | 0.991 |
rplX | rpsK | HMPREF0556_10421 | HMPREF0556_10435 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.995 |
rplX | rpsR | HMPREF0556_10421 | HMPREF0556_10269 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.979 |
rplX | rpsS | HMPREF0556_10421 | HMPREF0556_10414 | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.996 |
rpmB | rplX | HMPREF0556_11216 | HMPREF0556_10421 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.972 |
rpmB | rpmG-2 | HMPREF0556_11216 | HMPREF0556_12474 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein L33; COG: COG0267; Pfam: PF00471; InterPro: IPR001705; Belongs to the bacterial ribosomal protein bL33 family. | 0.966 |
rpmB | rpmH | HMPREF0556_11216 | HMPREF0556_10298 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein L34; COG: COG0230; Pfam: PF00468; InterPro: IPR000271; Belongs to the bacterial ribosomal protein bL34 family. | 0.986 |
rpmB | rpmI | HMPREF0556_11216 | HMPREF0556_11251 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein L35; COG: COG0291; Pfam: PF01632; InterPro: IPR001706; Belongs to the bacterial ribosomal protein bL35 family. | 0.976 |
rpmB | rpsD | HMPREF0556_11216 | HMPREF0556_12188 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.977 |
rpmB | rpsH | HMPREF0556_11216 | HMPREF0556_10424 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.975 |
rpmB | rpsI | HMPREF0556_11216 | HMPREF0556_10447 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein S9; COG: COG0103; Pfam: PF00380; InterPro: IPR000754; Belongs to the universal ribosomal protein uS9 family. | 0.977 |
rpmB | rpsK | HMPREF0556_11216 | HMPREF0556_10435 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.979 |
rpmB | rpsR | HMPREF0556_11216 | HMPREF0556_10269 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.984 |
rpmB | rpsS | HMPREF0556_11216 | HMPREF0556_10414 | Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383; Belongs to the bacterial ribosomal protein bL28 family. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.965 |