STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EV44_g1825Putative u4 tri-snrnp-associated protein. (519 aa)    
Predicted Functional Partners:
EV44_g0831
Putative 116 kDa u5 small nuclear ribonucleoprotein component.
   
 0.992
EV44_g5612
Putative pre-mrna processing splicing factor 8.
   
 0.987
EV44_g2319
Putative wd repeat-containing protein.
   
 0.984
EV44_g5987
Putative dna binding protein sart-1.
    
 0.968
EV44_g5157
Putative u4 tri-snrnp-associated protein.
   
 0.962
EV44_g0951
Putative pre-mrna-splicing atp-dependent rna helicase prp28.
   
 0.957
EV44_g4729
Putative u4 u6 small nuclear ribonucleoprotein prp4.
    
 0.954
EV44_g5756
Putative serine-threonine protein kinase.
    
   0.940
EV44_g5004
Putative u4 u6 small nuclear ribonucleoprotein prp3.
   
 0.937
EV44_g1363
Putative pre-mrna-splicing factor.
    
 0.931
Your Current Organism:
Erysiphe necator
NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.