EV44_g1639 protein (Erysiphe necator) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EV44_g1639

Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (535 aa)

Predicted Functional Partners:

EV44_g5292

0.977

EV44_g2660

0.977

EV44_g2229

0.938

EV44_g1803

0.935

EV44_g2401

0.934

EV44_g0930

0.931

EV44_g4678

0.929

EV44_g2482

0.925

EV44_g4720

0.915

EV44_g0941

0.915

Your Current Organism:

Erysiphe necator

NCBI taxonomy Id: 52586
Other names: E. necator, Uncinula necator, grape powdery mildew

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EV44_g0930	EV44_g0941	A0A0B1PC56	A0A0B1PBT5	Putative ribosomal processing rna binding nucleolar protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.929
EV44_g0930	EV44_g1639	A0A0B1PC56	A0A0B1PBZ8	Putative ribosomal processing rna binding nucleolar protein.	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	0.931
EV44_g0930	EV44_g1803	A0A0B1PC56	A0A0B1PCI0	Putative ribosomal processing rna binding nucleolar protein.	Putative brix domain-containing protein.	0.975
EV44_g0930	EV44_g2229	A0A0B1PC56	A0A0B1P670	Putative ribosomal processing rna binding nucleolar protein.	Putative pumilio domain-containing protein.	0.995
EV44_g0930	EV44_g2401	A0A0B1PC56	A0A0B1PGW7	Putative ribosomal processing rna binding nucleolar protein.	Putative constituent of 66s pre-ribosomal particles.	0.997
EV44_g0930	EV44_g2482	A0A0B1PC56	A0A0B1P572	Putative ribosomal processing rna binding nucleolar protein.	Putative rrna processing protein ebp2.	0.980
EV44_g0930	EV44_g4678	A0A0B1PC56	A0A0B1PB85	Putative ribosomal processing rna binding nucleolar protein.	Putative ribosome biogenesis protein brx1.	0.972
EV44_g0930	EV44_g4720	A0A0B1PC56	A0A0B1P197	Putative ribosomal processing rna binding nucleolar protein.	Putative rrna processing protein bystin.	0.914
EV44_g0941	EV44_g0930	A0A0B1PBT5	A0A0B1PC56	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative ribosomal processing rna binding nucleolar protein.	0.929
EV44_g0941	EV44_g1639	A0A0B1PBT5	A0A0B1PBZ8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	0.915
EV44_g0941	EV44_g1803	A0A0B1PBT5	A0A0B1PCI0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative brix domain-containing protein.	0.973
EV44_g0941	EV44_g2229	A0A0B1PBT5	A0A0B1P670	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative pumilio domain-containing protein.	0.882
EV44_g0941	EV44_g2401	A0A0B1PBT5	A0A0B1PGW7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative constituent of 66s pre-ribosomal particles.	0.982
EV44_g0941	EV44_g2482	A0A0B1PBT5	A0A0B1P572	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative rrna processing protein ebp2.	0.941
EV44_g0941	EV44_g4678	A0A0B1PBT5	A0A0B1PB85	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative ribosome biogenesis protein brx1.	0.943
EV44_g0941	EV44_g4720	A0A0B1PBT5	A0A0B1P197	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Putative rrna processing protein bystin.	0.999
EV44_g1639	EV44_g0930	A0A0B1PBZ8	A0A0B1PC56	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	Putative ribosomal processing rna binding nucleolar protein.	0.931
EV44_g1639	EV44_g0941	A0A0B1PBZ8	A0A0B1PBT5	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.915
EV44_g1639	EV44_g1803	A0A0B1PBZ8	A0A0B1PCI0	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	Putative brix domain-containing protein.	0.935
EV44_g1639	EV44_g2229	A0A0B1PBZ8	A0A0B1P670	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	Putative pumilio domain-containing protein.	0.938

page 1 of 4

Server load: low (28%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About