STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_0823PFAM: plasmid stabilization system; KEGG: deb:DehaBAV1_1039 addiction module antitoxin. (87 aa)    
Predicted Functional Partners:
Dbac_0824
KEGG: amr:AM1_2255 hypothetical protein.
 
     0.945
Dbac_0822
KEGG: syp:SYNPCC7002_A0027 hypothetical protein.
 
     0.618
Dbac_0825
PFAM: protein of unknown function DUF1045; KEGG: rce:RC1_0524 hypothetical protein.
       0.520
Dbac_2531
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.503
Dbac_1114
TIGRFAM: addiction module component, TIGR02574 family; KEGG: cpc:Cpar_1383 addiction module component, TIGR02574 family.
  
     0.429
Dbac_0458
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.410
Dbac_2257
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.410
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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